Keyword - Software

dsMTL: a computational framework for privacy-preserving, distributed multi-task machine learning.
Cao, Han; Zhang, Youcheng; Baumbach, Jan; Burton, Paul R; Dwyer, Dominic; Koutsouleris, Nikolaos; Matschinske, Julian; Marcon, Yannick; Rajan, Sivanesan; Rieg, Thilo; Ryser-Welch, Patricia; Späth, Julian; Herrmann, Carl; Schwarz, Emanuel
Bioinformatics, Volume 38, Issue 21 (2022)
PMID: 36073911 DOI: 10.1093/bioinformatics/btac616 
Citations: 7 (Scopus)
Tags: Study: GSE21138  | Study: GSE35977 | Study: GSE53987 | Study: phs000979.v3.p2

Orchestrating privacy-protected big data analyses of data from different resources with R and DataSHIELD.
Marcon, Yannick; Bishop, Tom; Avraam, Demetris; Escriba-Montagut, Xavier; Ryser-Welch, Patricia; Wheater, Stuart; Burton, Paul; González, Juan R
PLoS Comput Biol, Volume 17, Issue 3 (2021)
PMID: 33784300 DOI: 10.1371/journal.pcbi.1008880 
Citations: 22 (Scopus)
Tags: Consortia: ATHLETE | Consortia: Connected Health Cities North East North Cumbria | Consortia: EUCAN-Connect | Consortia: VEIS: 001-P-001647

Deep generative models in DataSHIELD.
Lenz, Stefan; Hess, Moritz; Binder, Harald
BMC Med Res Methodol, Volume 21, Issue 1 (2021)
PMID: 33812380 DOI: 10.1186/s12874-021-01237-6 
Citations: 10 (Scopus)
Tags: Consortia: GEMOLS | Consortia: MIRACUM

A Queue-Poll Extension and DataSHIELD: Standardised, Monitored, Indirect and Secure Access to Sensitive Data.
Gruendner, Julian; Prokosch, Hans-Ulrich; Schindler, Sebastian; Lenz, Stefan; Binder, Harald
Stud Health Technol Inform, Volume 258 (2019)
PMID: 30942726 DOI: 10.3233/978-1-61499-959-1-115 
Citations: 3 (Scopus)
Tags: Consortia: MIRACUM | Study: Erlangen University Hospital | Study: Freiburg University Hospital | Study: Magdeburg University Hospital

Software Application Profile: Opal and Mica: open-source software solutions for epidemiological data management, harmonization and dissemination.
Doiron, Dany; Marcon, Yannick; Fortier, Isabel; Burton, Paul; Ferretti, Vincent
Int J Epidemiol, Volume 46, Issue 5 (2017)
PMID: 29025122 DOI: 10.1093/ije/dyx180 
Citations: 66 (Scopus)
Tags: Consortia: BioSHaRE-EU | Consortia: InterConnect | Consortia: Maelstrom Research | Study: CLSA | Study: CPTP

Genomic cloud computing: legal and ethical points to consider.
Dove, Edward S; Joly, Yann; Tassé, Anne-Marie; Knoppers, Bartha M
Eur J Hum Genet, Volume 23, Issue 10 (2015)
PMID: 25248396 DOI: 10.1038/ejhg.2014.196 
Citations: 74 (Scopus)
Tags: Consortia: International Cancer Genome Consortium | Consortia: P3G